Characterization of INF56, a gene expressed during infection structure development of Uromyces appendiculatus.
Identifieur interne : 000B60 ( Main/Exploration ); précédent : 000B59; suivant : 000B61Characterization of INF56, a gene expressed during infection structure development of Uromyces appendiculatus.
Auteurs : X. Xuei [États-Unis] ; S. Bhairi ; R C Staples ; O C YoderSource :
- Gene [ 0378-1119 ] ; 1992.
Descripteurs français
- KwdFr :
- Animaux (MeSH), Basidiomycota (croissance et développement), Basidiomycota (génétique), Biosynthèse des protéines (MeSH), Boite TATA (MeSH), Cadres ouverts de lecture (MeSH), Données de séquences moléculaires (MeSH), Fabaceae (microbiologie), Gènes fongiques (MeSH), Humains (MeSH), Introns (MeSH), Maladies des plantes (génétique), Peptides (composition chimique), Peptides (génétique), Plantes médicinales (MeSH), Poulets (MeSH), Protéines fongiques (biosynthèse), Protéines fongiques (génétique), Régulation de l'expression des gènes fongiques (MeSH), Similitude de séquences d'acides nucléiques (MeSH), Séquence d'acides aminés (MeSH), Séquence nucléotidique (MeSH).
- MESH :
- biosynthèse : Protéines fongiques.
- composition chimique : Peptides.
- croissance et développement : Basidiomycota.
- génétique : Basidiomycota, Maladies des plantes, Peptides, Protéines fongiques.
- microbiologie : Fabaceae.
- Animaux, Biosynthèse des protéines, Boite TATA, Cadres ouverts de lecture, Données de séquences moléculaires, Gènes fongiques, Humains, Introns, Plantes médicinales, Poulets, Régulation de l'expression des gènes fongiques, Similitude de séquences d'acides nucléiques, Séquence d'acides aminés, Séquence nucléotidique.
English descriptors
- KwdEn :
- Amino Acid Sequence (MeSH), Animals (MeSH), Base Sequence (MeSH), Basidiomycota (genetics), Basidiomycota (growth & development), Chickens (MeSH), Fabaceae (microbiology), Fungal Proteins (biosynthesis), Fungal Proteins (genetics), Gene Expression Regulation, Fungal (MeSH), Genes, Fungal (MeSH), Humans (MeSH), Introns (MeSH), Molecular Sequence Data (MeSH), Open Reading Frames (MeSH), Peptides (chemistry), Peptides (genetics), Plant Diseases (genetics), Plants, Medicinal (MeSH), Protein Biosynthesis (MeSH), Sequence Homology, Nucleic Acid (MeSH), TATA Box (MeSH).
- MESH :
- chemical , biosynthesis : Fungal Proteins.
- chemical , chemistry : Peptides.
- genetics : Basidiomycota, Fungal Proteins, Peptides, Plant Diseases.
- growth & development : Basidiomycota.
- microbiology : Fabaceae.
- Amino Acid Sequence, Animals, Base Sequence, Chickens, Gene Expression Regulation, Fungal, Genes, Fungal, Humans, Introns, Molecular Sequence Data, Open Reading Frames, Plants, Medicinal, Protein Biosynthesis, Sequence Homology, Nucleic Acid, TATA Box.
Abstract
The bean rust fungus, Uromyces appendiculatus, undergoes thigmotropic differentiation to produce infection structures. Six differentiation-specific genes have been isolated and one, INF24, has been characterized [Bhairi et al., Gene 81 (1989) 237-243]. Here, we report the structure of a second gene, INF56, which was subcloned on a 2.6-kb fragment and sequenced. The location of the 1.0-kb INF56 transcript was determined by S1 nuclease protection and primer extension. A TATA box was found 38 bp upstream and a CAAT box 130 bp upstream from the major transcription start point (tsp). The gene contains two open reading frames: ORF2 is nested within ORF1; they share a 67-bp intron. ORF1 encodes a 14.1-kDa polypeptide which has an amino acid sequence rich in Gly, Pro and Ser. It has sequence similarity to a functional domain (V2) of mammalian cytokeratin type II. ORF2 encodes a 10.1-kDa polypeptide which is rich in Pro. It shares similarity with the cell-surface recognition region of chicken fibronectin. Hybrid selection and in vitro translation of the INF56 mRNA yielded two polypeptides of 15.5 and 23 kDa, as estimated by sodium dodecyl sulfate-polyacrylamide-gel electrophoresis. INF56 is constitutively expressed at a low level, but the abundance of its steady-state transcript is upshifted 4.5 h after spore hydration during the period that infection structures are formed.
DOI: 10.1016/0378-1119(92)90443-s
PubMed: 1544577
Affiliations:
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Six differentiation-specific genes have been isolated and one, INF24, has been characterized [Bhairi et al., Gene 81 (1989) 237-243]. Here, we report the structure of a second gene, INF56, which was subcloned on a 2.6-kb fragment and sequenced. The location of the 1.0-kb INF56 transcript was determined by S1 nuclease protection and primer extension. A TATA box was found 38 bp upstream and a CAAT box 130 bp upstream from the major transcription start point (tsp). The gene contains two open reading frames: ORF2 is nested within ORF1; they share a 67-bp intron. ORF1 encodes a 14.1-kDa polypeptide which has an amino acid sequence rich in Gly, Pro and Ser. It has sequence similarity to a functional domain (V2) of mammalian cytokeratin type II. ORF2 encodes a 10.1-kDa polypeptide which is rich in Pro. It shares similarity with the cell-surface recognition region of chicken fibronectin. Hybrid selection and in vitro translation of the INF56 mRNA yielded two polypeptides of 15.5 and 23 kDa, as estimated by sodium dodecyl sulfate-polyacrylamide-gel electrophoresis. INF56 is constitutively expressed at a low level, but the abundance of its steady-state transcript is upshifted 4.5 h after spore hydration during the period that infection structures are formed.</div></front></TEI><pubmed><MedlineCitation Status="MEDLINE" Owner="NLM"><PMID Version="1">1544577</PMID><DateCompleted><Year>1992</Year><Month>04</Month><Day>13</Day></DateCompleted><DateRevised><Year>2019</Year><Month>07</Month><Day>07</Day></DateRevised><Article PubModel="Print"><Journal><ISSN IssnType="Print">0378-1119</ISSN><JournalIssue CitedMedium="Print"><Volume>110</Volume><Issue>1</Issue><PubDate><Year>1992</Year><Month>Jan</Month><Day>02</Day></PubDate></JournalIssue><Title>Gene</Title><ISOAbbreviation>Gene</ISOAbbreviation></Journal><ArticleTitle>Characterization of INF56, a gene expressed during infection structure development of Uromyces appendiculatus.</ArticleTitle><Pagination><MedlinePgn>49-55</MedlinePgn></Pagination><Abstract><AbstractText>The bean rust fungus, Uromyces appendiculatus, undergoes thigmotropic differentiation to produce infection structures. Six differentiation-specific genes have been isolated and one, INF24, has been characterized [Bhairi et al., Gene 81 (1989) 237-243]. Here, we report the structure of a second gene, INF56, which was subcloned on a 2.6-kb fragment and sequenced. The location of the 1.0-kb INF56 transcript was determined by S1 nuclease protection and primer extension. A TATA box was found 38 bp upstream and a CAAT box 130 bp upstream from the major transcription start point (tsp). The gene contains two open reading frames: ORF2 is nested within ORF1; they share a 67-bp intron. ORF1 encodes a 14.1-kDa polypeptide which has an amino acid sequence rich in Gly, Pro and Ser. It has sequence similarity to a functional domain (V2) of mammalian cytokeratin type II. ORF2 encodes a 10.1-kDa polypeptide which is rich in Pro. It shares similarity with the cell-surface recognition region of chicken fibronectin. Hybrid selection and in vitro translation of the INF56 mRNA yielded two polypeptides of 15.5 and 23 kDa, as estimated by sodium dodecyl sulfate-polyacrylamide-gel electrophoresis. INF56 is constitutively expressed at a low level, but the abundance of its steady-state transcript is upshifted 4.5 h after spore hydration during the period that infection structures are formed.</AbstractText></Abstract><AuthorList CompleteYN="Y"><Author ValidYN="Y"><LastName>Xuei</LastName><ForeName>X</ForeName><Initials>X</Initials><AffiliationInfo><Affiliation>Department of Plant Pathology, Cornell University, Ithaca, NY 14853.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Bhairi</LastName><ForeName>S</ForeName><Initials>S</Initials></Author><Author ValidYN="Y"><LastName>Staples</LastName><ForeName>R C</ForeName><Initials>RC</Initials></Author><Author ValidYN="Y"><LastName>Yoder</LastName><ForeName>O C</ForeName><Initials>OC</Initials></Author></AuthorList><Language>eng</Language><DataBankList 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IdType="pubmed">1544577</ArticleId><ArticleId IdType="pii">0378-1119(92)90443-S</ArticleId><ArticleId IdType="doi">10.1016/0378-1119(92)90443-s</ArticleId></ArticleIdList></PubmedData></pubmed><affiliations><list><country><li>États-Unis</li></country><region><li>État de New York</li></region></list><tree><noCountry><name sortKey="Bhairi, S" sort="Bhairi, S" uniqKey="Bhairi S" first="S" last="Bhairi">S. Bhairi</name><name sortKey="Staples, R C" sort="Staples, R C" uniqKey="Staples R" first="R C" last="Staples">R C Staples</name><name sortKey="Yoder, O C" sort="Yoder, O C" uniqKey="Yoder O" first="O C" last="Yoder">O C Yoder</name></noCountry><country name="États-Unis"><region name="État de New York"><name sortKey="Xuei, X" sort="Xuei, X" uniqKey="Xuei X" first="X" last="Xuei">X. Xuei</name></region></country></tree></affiliations></record>Pour manipuler ce document sous Unix (Dilib)
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